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Home > Problems > Chapter 8
1. Finding runs of complementary sequence.
- Look for runs of complementary A/U and G/C base pairs (we will ignore G/U for simplicity) when the RNA molecule AGCCAUUUUUUGGCU is folded back on itself.
- Show that the molecule can form a stem-and-loop structure. Using the base-stacking energy values and destabilizing energy values of loops provided in Table 8.2, what will be the energy of the molecule?
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