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Table 13.2. Representative data analysis tools for microarrays

Tool

Lab

URL

ArrayMaker

Joseph DeRisi lab

http://www.microarrays.org/

BioConductor, Open Source collection

http://www.bioconductor.org/

BRB array tools

National Cancer Institute

http://linus.nci.nih.gov/BRB-ArrayTools.html

DCHIP

W.H. Wong lab

http://www.dchip.org

GENECLUSTER

http://www.genome.wi.mit.edu/MPR/software.html

GeneRage

http://www.ebi.ac.uk/research/cgg/services/rage/

GeneX

http://www.ncgr.org/research/genex/

Microarray guide

Pat Brown lab

http://cmgm.stanford.edu/pbrown/

Microarray software
microarrays.org. software resource

Michael Eisen lab

http://rana.lbl.gov/
http://www.microarrays.org/software.html

NIH Microarray

http://www.nhgri.nih.gov/DIR/LCG/15K/HTML/

TIGR functional genomics

http://www.tigr.org/microarray/

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